Polymorphisms for ABC46137

Schematic of mutation locations within contig assembly 'ABC46137_1'

(Hover mouse over vertical lines to see details of SNP locations. SNPs are in green, INDELS are in red)

View as SVG diagram



Polymorphic base positions


Positions indicated by red arrows are mapped SNPs.
SNPs detected by primers
Consensus sequence positions 1
7
4
1
9
7
1
9
8
2
3
0
2
3
2
2
8
4
3
0
7
3
2
9
3
3
7
3
6
0
3
7
4
3
9
8
4
1
6
4
4
4
4
5
1
5
6
7
5
7
6
7
0
4
-
7
8
4
7
8
7
8
5
1
8
5
4
8
9
3
9
4
6
9
6
2
1
0
7
0
1
0
8
0
Golden Promise |L03R04| L|a_1gCATCTCCGctgGCtCagg
Golden Promise |L03R04| R|a_1.........cTgGCGCAGGCTGCCGCTT
Golden Promise |L04R04| R|a_1.........CGATCTCAGGGTACAGCTC
Golden Promise |L04R04| L|a_1CCGACTCCGCGATCTCAGGGTACA
HS92 |L04R04| R|a_1.........cGAGCGCAAGCCAGAGCTT
HS92 |L03R04| L|a_1ccgacTCcGCttGCtcagg
HS92 |L04R04| L|a_1CCGTCCCCTCGAGCGCAAGCCAGA
HS92 |L03R04| R|a_1.........cTgGcGcagGCTGCCGTTT
Lina |L03R04| L|a_1CCATCTCCGCTgGCGCAg
Lina |L04R04| L|a_1TAGTTCTTGCAGGTGAGGGCTGCC
Lina |L03R04| R|a_1.........CAgGCGCAGGCTGCCGCTT
Lina |L04R04| R|a_1.........cAGGTGAGGGCTGCCGCTT
Morex |L03R04| R|a_1.........CTggcGcAGGCTGCCGTTT
Morex |L03R04| L|a_1CCATCTCTGCTGGCgCAGG
Morex |L04R04| R|a_1.......ttgaacatgtgcttacAGCTC
Morex |L04R04| L|a_1CCGACTCCGCGATCTCAGGGTACA
OWB D |L04R04| R|a_1.........gTAGCGCAGTCTGCCGCCT
OWB D |L04R04| L|a_1CCGTCCCCGGTAGCGCAGTCTGCC
OWB D |L03R04| L|a_1tccACTcgtctctacctgt
OWB D |L03R04| R|a_1..........aggcgcgGGCTGCCGCTT
Optic |L03R04| L|a_1CCATCTCcGctgtctCaggc
Optic |L03R04| R|a_1.........CagGCgCAGGCTGCCGCTT
Optic |L04R04| R|a_1.........CGATCTCAGGGTACAGCTC
Optic |L04R04| L|a_1CCAACTCCGCGATCTCAGGGTACA
OWB R |L04R04| R|a_1..........AGGTGAGGGCTGCCGCTT
OWB R |L03R04| L|a_1CCATCtCCGcTgGcGcAgg
OWB R |L04R04| L|a_1TAGTTCTTGCAGGTGAGGGCTGCC
OWB R |L03R04| R|a_1.........cTgGCgCAGGCTGCCGCTT
Steptoe |L03R04| R|a_1.........ctgg*tcAgGCTGCCGTTT
Steptoe |L04R04| L|a_1TAGTTCTTGCAGGTGAGGGCTGCC
Steptoe |L03R04| L|a_1tgcgtcatcatactgcagg
Steptoe |L04R04| R|a_1.........cAGGTGAGGGCTGCCGCTT